Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935105.1_cds_XP_016481033.1_72411
CDS Infomation

[gene=LOC107802104] [db_xref=GeneID:107802104] [protein=sodium transporter HKT1-like] [protein_id=XP_016481033.1] [location=join(1206..2419,4001..4228,6242..6440)] [gbkey=CDS]
Sequence

ATGAGTAGCTTATCTTATTTCGGAAAGAAGCTACAACATCTTTGTAGCACAATATTTTTG
TATCTGGCTTGTTTGTGTAGATCAGCATGCTTCCTCATTTCTTGCCTCCACAAATCCATT
CTTCTCAGAGTGAACAAAATTTTCGTACAAATATTTTACTTCATTTTCATATCTCTTTTT
GGTTTTTGTATTCTCAGAATCTTGAAGCCAAGGAGTGTTGATTTTACACCTAGGAATTTA
GACTTGTTCTTCATTTCTGTTTCTTCAGTAACTGTCTCAAGCATGTCCACTGTAGAAATG
GAAGTCTTTTCCAATTCCCAACTCATTCTTATTACATTTTTAATGTTCATAGGTGGTGAA
ATCTTCACTTCTATGGTTGGGCTTCATTTAATTAGGTCCAAGTTCAAGCCATGGAGAAAA
GATAGCAAAATTGAGTCAGTAATTAGTAGTACTACCACTTCTCCAAGAAACTCAGATTTT
AATGATGATATTGAGTTGGACATTGTTGTAATACCTGACTCCCCAAAACCAAAGTCAGAA
AATGATGAATTTCAAGATGATTTTGGATCATCAGATAAACAAACTCTCAAGTACCAATCT
ATCAAATTCCTAGGGTTTGTAACATTAGTTTATCTTCTAGTCATCAACATTATTGGTGTC
TCATCAGTTCTAGTTTATCTAGCCTGTGTTTCAAGTGCAAAAGATGTACTAAGAAACAAG
GGGCTAAAAACCTTCACTTTTGCTATTTTTACAGTTGTCTCAACCTTTGCTAGCTGTGGT
TTTGTTCCAACCAACGAAAACATGATGGTATTTAGCAAGAACTCAGGTCTTCTTTTGATT
CTAATCCCTCAAGTCCTATTTGGAAACACATTATATCCAGCATGTTTGAGACTTTGTATT
AAGTTCTTGGGAAAATTCTCTAAGAAAAGAGAAGCTAAATATTTGTTGAAGCATTCAAGA
GAAATAAGACATCTCCACTTGCTTCCTAGCCAACATTCAAGATTATTAGTGATCACAGTG
TTTGGATTCATCTTGATCCAATTGATTATGTTTTGCTCTTTGGAGTGGAAATCTTCTTCT
CTCAATGGACTAAATAGCTACCAGAAAATAGTGGGATCGTTATTTCAAGTTGTGAATGCA
AGACACACCGGTGAAACCATTGTTGATATCTCCACTGTTGCCCCAGCCATTTTGGTGGTA
TTCATAGTAATGATGTATCTTCCTCCATATACATCATTTATACCAGTTAAAGGTGTTGAA
GAAACCCCAGAAGAGACTGTGGAAGAAAAACAAGGAAGAGGAAAAGTTGCAGAAAATCTC
ATACTTTCCCAACTTTCTTATATAATCTTCTTCATTGTTCTAATTTGCATCACAGAAAGG
AAACGGACGAAGGATGACCCATTCAACTTTAATGTGTTGAATATCACTCTTGAAGTCGTA
AGTGCATATGGAAATGTTGGTTTCACAACAGGATATAGTTGTGATCGGATGATAAACAGA
GATACAACTTGTAAGAATAAAACGTATGGATTTGTAGGGAAATGGAGTGATGAAGGTAAA
TTAATTCTCATTATTGTCATGTTTTTCGGAAGATTGAAGAAGTTCAATATGCAAGGGGGA
AAAGCATGGAAGCTCTTGTAA

Peptide Sequence

PEP ID

XP_016481033.1
PEP Infomation

PREDICTED: sodium transporter HKT1-like [Nicotiana tabacum]
Sequence

MSSLSYFGKKLQHLCSTIFLYLACLCRSACFLISCLHKSILLRVNKIFVQIFYFIFISLF
GFCILRILKPRSVDFTPRNLDLFFISVSSVTVSSMSTVEMEVFSNSQLILITFLMFIGGE
IFTSMVGLHLIRSKFKPWRKDSKIESVISSTTTSPRNSDFNDDIELDIVVIPDSPKPKSE
NDEFQDDFGSSDKQTLKYQSIKFLGFVTLVYLLVINIIGVSSVLVYLACVSSAKDVLRNK
GLKTFTFAIFTVVSTFASCGFVPTNENMMVFSKNSGLLLILIPQVLFGNTLYPACLRLCI
KFLGKFSKKREAKYLLKHSREIRHLHLLPSQHSRLLVITVFGFILIQLIMFCSLEWKSSS
LNGLNSYQKIVGSLFQVVNARHTGETIVDISTVAPAILVVFIVMMYLPPYTSFIPVKGVE
ETPEETVEEKQGRGKVAENLILSQLSYIIFFIVLICITERKRTKDDPFNFNVLNITLEVV
SAYGNVGFTTGYSCDRMINRDTTCKNKTYGFVGKWSDEGKLILIIVMFFGRLKKFNMQGG
KAWKLL

Transcript Sequence

Gene sequence data has not been registered.